BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B02SP1|AL425803
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 1574 0.0
>3x_Contig1674
Length = 12281
Score = 1574 bits (794), Expect = 0.0
Identities = 794/794 (100%)
Strand = Plus / Plus
Query: 1 tatgggaagagactggattggatgtattgcacgttgattatgtaactacccagccttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1856 tatgggaagagactggattggatgtattgcacgttgattatgtaactacccagccttggc 1915
Query: 61 ccttcacaaacaacattatgatcgggtgcctagcagtggtggataaagcacaacaggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1916 ccttcacaaacaacattatgatcgggtgcctagcagtggtggataaagcacaacaggtgg 1975
Query: 121 atcttggcaacgatgacgagttaatggatgcaaaatggttcgccaaggacgatgttaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1976 atcttggcaacgatgacgagttaatggatgcaaaatggttcgccaaggacgatgttaggc 2035
Query: 181 gaatgctcgactccggaatggattcctacggtttactaagagaccccgtaacagggattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2036 gaatgctcgactccggaatggattcctacggtttactaagagaccccgtaacagggattg 2095
Query: 241 gtttacccaacgataagacaattgcaaaccgtctcatcagagcatgtgtataagttatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2096 gtttacccaacgataagacaattgcaaaccgtctcatcagagcatgtgtataagttatat 2155
Query: 301 aatggactaattatgagccgttatatattgcccattctaaacagttaatattctcaatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2156 aatggactaattatgagccgttatatattgcccattctaaacagttaatattctcaatct 2215
Query: 361 atttcccgaatgttccctgttccttcagctgacgtttttaaaatatcgtagaaaatcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2216 atttcccgaatgttccctgttccttcagctgacgtttttaaaatatcgtagaaaatcctc 2275
Query: 421 cgagaattgtatacacaatccgcattcataactcagatcggaatacctcatataactgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2276 cgagaattgtatacacaatccgcattcataactcagatcggaatacctcatataactgct 2335
Query: 481 gctccttgtcccttcacactcacttttggttttacatgtaattacgatttacttcgtaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2336 gctccttgtcccttcacactcacttttggttttacatgtaattacgatttacttcgtaca 2395
Query: 541 acttcatggaattttactagtaaaatgtccatccggatttgagtcaaataaagaacaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2396 acttcatggaattttactagtaaaatgtccatccggatttgagtcaaataaagaacaaaa 2455
Query: 601 aagggtataaattcagctggaaaaggctaagaaggtgacaatgacacaagtaccaattat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2456 aagggtataaattcagctggaaaaggctaagaaggtgacaatgacacaagtaccaattat 2515
Query: 661 acagtctagaaggttcactgtaagcgactcgaaacaataatcaaaatgacaacaagcaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2516 acagtctagaaggttcactgtaagcgactcgaaacaataatcaaaatgacaacaagcaaa 2575
Query: 721 atgttacaagtgattggacatagaggatttaaagccaagtacccagagaatacattacta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2576 atgttacaagtgattggacatagaggatttaaagccaagtacccagagaatacattacta 2635
Query: 781 tgttacgagaaagc 794
||||||||||||||
Sbjct: 2636 tgttacgagaaagc 2649
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4605
Number of Sequences: 1807
Number of extensions: 4605
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)